# Send Clarity Research to your agent
Hand the extracted package to your coding agent with a concrete install brief instead of figuring it out manually.
## Fast path
- Download the package from Yavira.
- Extract it into a folder your agent can access.
- Paste one of the prompts below and point your agent at the extracted folder.
## Suggested prompts
### New install

```text
I downloaded a skill package from Yavira. Read SKILL.md from the extracted folder and install it by following the included instructions. Tell me what you changed and call out any manual steps you could not complete.
```
### Upgrade existing

```text
I downloaded an updated skill package from Yavira. Read SKILL.md from the extracted folder, compare it with my current installation, and upgrade it while preserving any custom configuration unless the package docs explicitly say otherwise. Summarize what changed and any follow-up checks I should run.
```
## Machine-readable fields
```json
{
  "schemaVersion": "1.0",
  "item": {
    "slug": "clarity-research",
    "name": "Clarity Research",
    "source": "tencent",
    "type": "skill",
    "category": "开发工具",
    "sourceUrl": "https://clawhub.ai/clarityprotocol/clarity-research",
    "canonicalUrl": "https://clawhub.ai/clarityprotocol/clarity-research",
    "targetPlatform": "OpenClaw"
  },
  "install": {
    "downloadUrl": "/downloads/clarity-research",
    "sourceDownloadUrl": "https://wry-manatee-359.convex.site/api/v1/download?slug=clarity-research",
    "sourcePlatform": "tencent",
    "targetPlatform": "OpenClaw",
    "packageFormat": "ZIP package",
    "primaryDoc": "SKILL.md",
    "includedAssets": [
      "SKILL.md",
      "scripts/api_client.py",
      "scripts/query_variants.py"
    ],
    "downloadMode": "redirect",
    "sourceHealth": {
      "source": "tencent",
      "status": "healthy",
      "reason": "direct_download_ok",
      "recommendedAction": "download",
      "checkedAt": "2026-04-30T16:55:25.780Z",
      "expiresAt": "2026-05-07T16:55:25.780Z",
      "httpStatus": 200,
      "finalUrl": "https://wry-manatee-359.convex.site/api/v1/download?slug=network",
      "contentType": "application/zip",
      "probeMethod": "head",
      "details": {
        "probeUrl": "https://wry-manatee-359.convex.site/api/v1/download?slug=network",
        "contentDisposition": "attachment; filename=\"network-1.0.0.zip\"",
        "redirectLocation": null,
        "bodySnippet": null
      },
      "scope": "source",
      "summary": "Source download looks usable.",
      "detail": "Yavira can redirect you to the upstream package for this source.",
      "primaryActionLabel": "Download for OpenClaw",
      "primaryActionHref": "/downloads/clarity-research"
    },
    "validation": {
      "installChecklist": [
        "Use the Yavira download entry.",
        "Review SKILL.md after the package is downloaded.",
        "Confirm the extracted package contains the expected setup assets."
      ],
      "postInstallChecks": [
        "Confirm the extracted package includes the expected docs or setup files.",
        "Validate the skill or prompts are available in your target agent workspace.",
        "Capture any manual follow-up steps the agent could not complete."
      ]
    }
  },
  "links": {
    "detailUrl": "https://openagent3.xyz/skills/clarity-research",
    "downloadUrl": "https://openagent3.xyz/downloads/clarity-research",
    "agentUrl": "https://openagent3.xyz/skills/clarity-research/agent",
    "manifestUrl": "https://openagent3.xyz/skills/clarity-research/agent.json",
    "briefUrl": "https://openagent3.xyz/skills/clarity-research/agent.md"
  }
}
```
## Documentation

### Clarity Research Skill

Search protein folding research data from Clarity Protocol, a community-driven platform for protein mutation analysis using AlphaFold2 via ColabFold.

### Quick Start

List all available variants:

python scripts/query_variants.py

Filter by disease:

python scripts/query_variants.py --disease Alzheimer

Filter by protein name:

python scripts/query_variants.py --protein-name MAPT

### Output Fields

Each variant result includes:

id: Unique fold identifier
protein_name: Protein name (e.g., "tau", "APP")
variant: Mutation notation (e.g., "P301L", "A246E")
disease: Associated disease
uniprot_id: UniProt database identifier
average_confidence: AlphaFold confidence score (0-100)
created_at: When the fold was created

### Rate Limits

Anonymous (no API key): 10 requests/minute
With API key: 100 requests/minute

To use an API key, set the CLARITY_API_KEY environment variable:

export CLARITY_API_KEY=your_key_here
python scripts/query_variants.py

Get your API key at https://clarityprotocol.io

### Error Handling

404 Not Found: The endpoint or resource does not exist.

429 Rate Limit: You've exceeded the rate limit. The script will display how long to wait before retrying.

500 Server Error: The API server encountered an error. Try again later.

Timeout: The request took longer than 30 seconds. The server may be under heavy load.

### Pagination

Results are paginated. The API returns a next_cursor field if more results are available. The script automatically handles pagination for typical queries.

### Use Cases

Explore available protein variants for a specific disease
Find all folded mutations for a particular protein
Get an overview of research data available in Clarity Protocol
Identify fold IDs for detailed analysis with other skills
## Trust
- Source: tencent
- Verification: Indexed source record
- Publisher: clarityprotocol
- Version: 1.0.0
## Source health
- Status: healthy
- Source download looks usable.
- Yavira can redirect you to the upstream package for this source.
- Health scope: source
- Reason: direct_download_ok
- Checked at: 2026-04-30T16:55:25.780Z
- Expires at: 2026-05-07T16:55:25.780Z
- Recommended action: Download for OpenClaw
## Links
- [Detail page](https://openagent3.xyz/skills/clarity-research)
- [Send to Agent page](https://openagent3.xyz/skills/clarity-research/agent)
- [JSON manifest](https://openagent3.xyz/skills/clarity-research/agent.json)
- [Markdown brief](https://openagent3.xyz/skills/clarity-research/agent.md)
- [Download page](https://openagent3.xyz/downloads/clarity-research)