{ "schemaVersion": "1.0", "item": { "slug": "pmc-harvest", "name": "PMC Harvest", "source": "tencent", "type": "skill", "category": "开发工具", "sourceUrl": "https://clawhub.ai/angusthefuzz/pmc-harvest", "canonicalUrl": "https://clawhub.ai/angusthefuzz/pmc-harvest", "targetPlatform": "OpenClaw" }, "install": { "downloadMode": "redirect", "downloadUrl": "/downloads/pmc-harvest", "sourceDownloadUrl": "https://wry-manatee-359.convex.site/api/v1/download?slug=pmc-harvest", "sourcePlatform": "tencent", "targetPlatform": "OpenClaw", "installMethod": "Manual import", "extraction": "Extract archive", "prerequisites": [ "OpenClaw" ], "packageFormat": "ZIP package", "includedAssets": [ "SKILL.md", "lib/api.js", "scripts/pmc-harvest.js" ], "primaryDoc": "SKILL.md", "quickSetup": [ "Download the package from Yavira.", "Extract the archive and review SKILL.md first.", "Import or place the package into your OpenClaw setup." ], "agentAssist": { "summary": "Hand the extracted package to your coding agent with a concrete install brief instead of figuring it out manually.", "steps": [ "Download the package from Yavira.", "Extract it into a folder your agent can access.", "Paste one of the prompts below and point your agent at the extracted folder." ], "prompts": [ { "label": "New install", "body": "I downloaded a skill package from Yavira. Read SKILL.md from the extracted folder and install it by following the included instructions. Tell me what you changed and call out any manual steps you could not complete." }, { "label": "Upgrade existing", "body": "I downloaded an updated skill package from Yavira. Read SKILL.md from the extracted folder, compare it with my current installation, and upgrade it while preserving any custom configuration unless the package docs explicitly say otherwise. Summarize what changed and any follow-up checks I should run." } ] }, "sourceHealth": { "source": "tencent", "status": "healthy", "reason": "direct_download_ok", "recommendedAction": "download", "checkedAt": "2026-04-30T16:55:25.780Z", "expiresAt": "2026-05-07T16:55:25.780Z", "httpStatus": 200, "finalUrl": "https://wry-manatee-359.convex.site/api/v1/download?slug=network", "contentType": "application/zip", "probeMethod": "head", "details": { "probeUrl": "https://wry-manatee-359.convex.site/api/v1/download?slug=network", "contentDisposition": "attachment; filename=\"network-1.0.0.zip\"", "redirectLocation": null, "bodySnippet": null }, "scope": "source", "summary": "Source download looks usable.", "detail": "Yavira can redirect you to the upstream package for this source.", "primaryActionLabel": "Download for OpenClaw", "primaryActionHref": "/downloads/pmc-harvest" }, "validation": { "installChecklist": [ "Use the Yavira download entry.", "Review SKILL.md after the package is downloaded.", "Confirm the extracted package contains the expected setup assets." ], "postInstallChecks": [ "Confirm the extracted package includes the expected docs or setup files.", "Validate the skill or prompts are available in your target agent workspace.", "Capture any manual follow-up steps the agent could not complete." ] }, "downloadPageUrl": "https://openagent3.xyz/downloads/pmc-harvest", "agentPageUrl": "https://openagent3.xyz/skills/pmc-harvest/agent", "manifestUrl": "https://openagent3.xyz/skills/pmc-harvest/agent.json", "briefUrl": "https://openagent3.xyz/skills/pmc-harvest/agent.md" }, "agentAssist": { "summary": "Hand the extracted package to your coding agent with a concrete install brief instead of figuring it out manually.", "steps": [ "Download the package from Yavira.", "Extract it into a folder your agent can access.", "Paste one of the prompts below and point your agent at the extracted folder." ], "prompts": [ { "label": "New install", "body": "I downloaded a skill package from Yavira. Read SKILL.md from the extracted folder and install it by following the included instructions. Tell me what you changed and call out any manual steps you could not complete." }, { "label": "Upgrade existing", "body": "I downloaded an updated skill package from Yavira. Read SKILL.md from the extracted folder, compare it with my current installation, and upgrade it while preserving any custom configuration unless the package docs explicitly say otherwise. Summarize what changed and any follow-up checks I should run." } ] }, "documentation": { "source": "clawhub", "primaryDoc": "SKILL.md", "sections": [ { "title": "PMC Harvest", "body": "Fetch full-text articles from PubMed Central using official NCBI APIs." }, { "title": "Features", "body": "E-utilities search — Find articles by journal, year, query\nOAI-PMH full text — Retrieve complete article XML (open access only)\nBatch harvesting — Process multiple journals at once\nAbstract fetch — Lightweight retrieval for review queues\nNo API key required — Uses public NCBI APIs (rate-limited)" }, { "title": "Usage", "body": "# Search a journal\nnode {baseDir}/scripts/pmc-harvest.js --search \"J Stroke[journal]\" --year 2025\n\n# Fetch full text for a specific article\nnode {baseDir}/scripts/pmc-harvest.js --fetch PMC12345678\n\n# Batch harvest from multiple journals\nnode {baseDir}/scripts/pmc-harvest.js --harvest journals.json --year 2025\n\n# Test with known journals\nnode {baseDir}/scripts/pmc-harvest.js --test" }, { "title": "Options", "body": "FlagDescription--search PMC search query (use journal[name] format)--year Filter by publication year--max Max results (default: 100)--fetch Fetch full text for specific PMCID--harvest Batch harvest from JSON journal list--testRun test with sample journals" }, { "title": "Programmatic API", "body": "const pmc = require('{baseDir}/lib/api.js');\n\n// Search\nconst { count, pmcids } = await pmc.searchJournal('\"J Stroke\"[journal]', { year: 2025 });\n\n// Get summaries\nconst summaries = await pmc.getSummaries(pmcids);\n\n// Fetch full text\nconst { available, xml, reason } = await pmc.fetchFullText('PMC12345678');\n\n// Parse JATS XML\nconst { title, abstract, body } = pmc.parseJATS(xml);\n\n// Fetch abstract only (lightweight)\nconst { title, abstract } = await pmc.fetchAbstract('PMC12345678');" }, { "title": "Journal Query Examples", "body": "const queries = {\n 'Stroke': '\"Stroke\"[journal]',\n 'Journal of Stroke': '\"J Stroke\"[journal]',\n 'Stroke & Vascular Neurology': '\"Stroke Vasc Neurol\"[journal]',\n 'European Stroke Journal': '\"Eur Stroke J\"[journal]',\n 'BMC Neurology': '\"BMC Neurol\"[journal]'\n};" }, { "title": "Limitations", "body": "OAI-PMH only returns open-access articles — restricted content unavailable\nRate limits — ~3 requests/second without API key\nPeak hours — NCBI recommends avoiding 5AM-9PM ET for large batches" }, { "title": "API Reference", "body": "This skill wraps NCBI's official APIs:\n\nE-utilities: https://eutils.ncbi.nlm.nih.gov/entrez/eutils\n\nesearch.fcgi — Search PMC\nesummary.fcgi — Get article metadata\n\n\nOAI-PMH: https://pmc.ncbi.nlm.nih.gov/api/oai/v1/mh\n\nGetRecord — Fetch full text XML\n\nFull docs: https://www.ncbi.nlm.nih.gov/books/NBK25501/" } ], "body": "PMC Harvest\n\nFetch full-text articles from PubMed Central using official NCBI APIs.\n\nFeatures\nE-utilities search — Find articles by journal, year, query\nOAI-PMH full text — Retrieve complete article XML (open access only)\nBatch harvesting — Process multiple journals at once\nAbstract fetch — Lightweight retrieval for review queues\nNo API key required — Uses public NCBI APIs (rate-limited)\nUsage\n# Search a journal\nnode {baseDir}/scripts/pmc-harvest.js --search \"J Stroke[journal]\" --year 2025\n\n# Fetch full text for a specific article\nnode {baseDir}/scripts/pmc-harvest.js --fetch PMC12345678\n\n# Batch harvest from multiple journals\nnode {baseDir}/scripts/pmc-harvest.js --harvest journals.json --year 2025\n\n# Test with known journals\nnode {baseDir}/scripts/pmc-harvest.js --test\n\nOptions\nFlag\tDescription\n--search \tPMC search query (use journal[name] format)\n--year \tFilter by publication year\n--max \tMax results (default: 100)\n--fetch \tFetch full text for specific PMCID\n--harvest \tBatch harvest from JSON journal list\n--test\tRun test with sample journals\nProgrammatic API\nconst pmc = require('{baseDir}/lib/api.js');\n\n// Search\nconst { count, pmcids } = await pmc.searchJournal('\"J Stroke\"[journal]', { year: 2025 });\n\n// Get summaries\nconst summaries = await pmc.getSummaries(pmcids);\n\n// Fetch full text\nconst { available, xml, reason } = await pmc.fetchFullText('PMC12345678');\n\n// Parse JATS XML\nconst { title, abstract, body } = pmc.parseJATS(xml);\n\n// Fetch abstract only (lightweight)\nconst { title, abstract } = await pmc.fetchAbstract('PMC12345678');\n\nJournal Query Examples\nconst queries = {\n 'Stroke': '\"Stroke\"[journal]',\n 'Journal of Stroke': '\"J Stroke\"[journal]',\n 'Stroke & Vascular Neurology': '\"Stroke Vasc Neurol\"[journal]',\n 'European Stroke Journal': '\"Eur Stroke J\"[journal]',\n 'BMC Neurology': '\"BMC Neurol\"[journal]'\n};\n\nLimitations\nOAI-PMH only returns open-access articles — restricted content unavailable\nRate limits — ~3 requests/second without API key\nPeak hours — NCBI recommends avoiding 5AM-9PM ET for large batches\nAPI Reference\n\nThis skill wraps NCBI's official APIs:\n\nE-utilities: https://eutils.ncbi.nlm.nih.gov/entrez/eutils\nesearch.fcgi — Search PMC\nesummary.fcgi — Get article metadata\nOAI-PMH: https://pmc.ncbi.nlm.nih.gov/api/oai/v1/mh\nGetRecord — Fetch full text XML\n\nFull docs: https://www.ncbi.nlm.nih.gov/books/NBK25501/" }, "trust": { "sourceLabel": "tencent", "provenanceUrl": "https://clawhub.ai/angusthefuzz/pmc-harvest", "publisherUrl": "https://clawhub.ai/angusthefuzz/pmc-harvest", "owner": "angusthefuzz", "version": "1.0.0", "license": null, "verificationStatus": "Indexed source record" }, "links": { "detailUrl": "https://openagent3.xyz/skills/pmc-harvest", "downloadUrl": "https://openagent3.xyz/downloads/pmc-harvest", "agentUrl": "https://openagent3.xyz/skills/pmc-harvest/agent", "manifestUrl": "https://openagent3.xyz/skills/pmc-harvest/agent.json", "briefUrl": "https://openagent3.xyz/skills/pmc-harvest/agent.md" } }